Scripts

• TimeMax.s2s - Script for the script bar to show the entire x range
• optimise.s2s - Script for the script bar to y-optimize all channels
• DelCur.s2s - Script for the script bar to delete all vertical and horizontal cursors on one mouse click.
• displSwitch.s2s - Script to switch between the default view with small "Times" font and a view with a large "Arial" font. In the large font view all channel. numbers and labels are removed and the x axis is switched to scale bar mode. Useful for copy/paste into a graphics program.
• ChanWeight.s2s - Script to set and reset the relative vertical space a channel takes up in a view.
• Offset.s2s - Allows you to add an offset to a waveform channel.
• ConcatFiles.s2s - Script to create a new file that holds waveform data from two consecutive files.
• EMFsequ.s2s - Script to automatically output metafiles from sequential time windows of a time view. You specify a duration and an overlap between consecutive files. A sequence of metafiles is saved.
• trigEMF.s2s - Script to automatically output metafiles from time windows around a trigger event channel in a time view. You need an event channel that will trigger the time window around it to be exported as a metafile. You specify a duration and an offset (pretrigger time). A sequence of metafiles is saved.

• multiSweep.s2s - Script to plot multiple sweeps of waveform data with fixed delay and duration from a trigger.
• WolfieSweep.s2s - Script to plot multiple sweeps of waveform data with fixed delay and duration from a trigger. This is Wolfgang Stein's modification of my script that gets rid of the 2 channel limit. It doesn't have offset though and needs more interaction.
• IVcurve.s2s - Script to return IV relationships from square commands in a time view.
• XY_IVcurve.s2s - Script to do IV measurements from VC or CC data in XY views created with "multiSweeps".
• SweepDiff.s2s - Script to plot the difference between two multisweep plots. For use with control/treatment episodic clamp data.
• PSPparamAv.s2s - Crude script to return PSP parameters from a waveform average. It's crude because you have to set 7 vertical cursors to the right positions first, meaning you do most of the measurements by hand.
• trainPSPamp.s2s - Script to measure the amplitudes of PSPs in trains or bursts. Returns amplitude, relative time and number within a train, so you can later sort and pool 1st, 2nd, 3rd event etc.
• TrigPSP.s2s - Script to return PSP parameters for seperate events.
• aab.s2s - Script to measure the area above baseline for epsps or ejps.
• instCorr.s2s - Script to do fast scatterplots of EPSP or EJP amplitudes from 2 waveform channels to see if they are correlated.
• muscletransf.s2s - Script to create muscle tension output from spike train event channel input using a te-at function. This is based on Chuck Geier's Thesis from Scott Hooper's lab. He showed that the tension of the Panulirus p1 muscle can be quite accurately modeled by sending the spike train through 3 sequential linear RC filters (tau:200ms).

• IF_ISI.s2s - Script to dump instantaneous frequencies and interspike intervals to the log window. You need an event channel that holds the spike times.
• rate_meanfreq.s2s - Script to extract rates and mean frequencies from an event channel. You have to specify an event channel and a bin size.
• delFilter.s2s - Script to sort spikes according to 2 different delay times between 2 recording sites ("delay filter").

• burststat.s2s - Script to extract values for single channel burst data. Returns cycle period, instantaneous burst frequency, burst duration, duty cycle, number of spikes/burst, spike frequency within each burst.
• phaseburst.s2s - Script for phase analysis of two or three bursting neurons or nerves. Returns cycle period, instantaneous burst frequency, burst duration, duty cycle, number of spikes/burst, spike frequency within each burst, delay, phase.
• CycleCount.s2s - Counts the number of cycles of a fast (e.g., pyloric) rhythm per cycle of a slower rhythm (e.g., gastric). This includes the fractions of the fast cycles at the beginning and end of a slow cycle.
• PRC.s2s - Script to do phase-response analysis.
• trigBurst.s2s - Script to do burst analysis in episodes defined by a trigger.
• missburst.s2s - Script to check the regularity of alternation of two bursting neurons. Returns normal burststatistics (as in "burststat") for a reference channel and in addition returns the number of bursts of a second channel in each reference cycle.

• pyloricBmk.s2s - “Pyloric burstmake”. Script to detect PD, LP and PY spikes and bursts.
• pyloricPhase.s2s - This is a customized version of "phaseburst" for the pyloric rhythm. You don't have to assign anything in dialogs.
• pylPhConsec.s2s - Script to do pyloric phase analysis (PD, LP, PY) from consecutive files. This is intended for large series of files but you can also use it for single files.
• gastropyloric.s2s - Script to do burst analysis of a fast rhythmic signal with respect to a slow rhythmic signal (as in pyloric/gastric).

• batchImp.s2s - Script to convert a batch of files in foreign format (e.g., Axon) into spike2 files.
• batchburst.s2s - Script to do full burst analysis for one channel in a sequence of files.
• batchbfast.s2s - Script to do fast burst analysis for one channel in a sequence of files. This only returns the means and SDs for burst duration and cycle periods, not single values for every burst.
• batchIF_ISI.s2s - Script to dump inst freq and ISIs to the log window in batch processing mode.
• batchRate.s2s - Script to rates and mean frequencies to the log window in batch processing mode.