Genomic
Bases of Neuronal Identity and
Plasticity
Our
laboratory works to characterize
basic mechanisms underlying
the design of nervous systems
and evolution of neuronal signaling
mechanisms. The major questions
are: (1) why are individual
neurons so different from each
other, (2) how do they maintain
such precise connections between
each other, (3) how does this
fixed wiring result in such
enormous neuronal plasticity
and (4) how does this contribute
to learning and memory mechanisms?
By taking advantage of relatively
simpler nervous systems of invertebrate
animals as models, we conbine
neuroscience,genomics, bioinformatics,
evolutionary theory, zoology,
molecular biology, microanalytical
chemistry and nanoscience to
understand how neurons operate,
remember and learn.
Current
Projects
As
part of the NIH Center of Excellence
in Genomic Sciences, our first
project investigates the genomic
basis of neuronal identity and
plasticity. Due to the tremendous
difficulties in mapping single
cells and processes in the mammalian
brain, we study the giant neurons
of the sea slug Aplysia
californica, a well-established
model organism for cellular
neuroscience. Our objective
is to investigate nearly all
messenger RNA (mRNA) involved
in simple feeding and defensive
networks.
Genomic
Bases of Neuronal Identity and
Plasticity. This year
we have completed our collection
and initial inventory of Aplysia
neuronal mRNAs from identified
neurons and even from their
individual processes and growth
cones.
In collaboration with Columbia
University (J. Ju and E. Kandel),
we have generated more than
230,000 molecular markers of
expressed genes (ESTs) and identified
thousands of unique Aplysia
genes operating in the central
nervous system. These include
genes associated with neurodevelopment,
synaptogenesis and memory. We
also identified several dozen
genes homologous to those associated
with human diseases such as
Alzheimer’s disease and
causes of mental retardation
(the Alzheimer’s disease
related protein and the Fragile
X mental retardation protein).
We are analyzing the functional
role of these novel and critical
genes using Aplysia-specific
microarrays, in situ
hybridization, capillary electrophoresis,
confocal and time-lapse imaging
and microelectrode techniques.
These technologies are integrated
to elucidate the entire molecular
machinery of a living neuron.
The neuronal transcriptome of
Aplysia has been published.
For more informationa and to
view the abstract, click here.
Our lab has also embarked on
a project, supported by NIH,
to sequence the entire Aplysia
genome. Click
here to find out more.
Development
of Innovative Bionanotechnologies
for Direct Single Cell Genomic
and Microchemical Analysis.
We are working to reveal the
complex, large-scale molecular
machinery of individual neurons
by monitoring, at real physiological
time, the activity of thousands
of genes
and hundreds of metabolites
in the cell. Our goal is to
identify a set of genes that
determine neuronal identity
and control long-term nervous
system modifications such as
injury, learning and memory.
Although we have succeeded with
single neuron gene expression
profiling using custom
made microarrays, real time
measurements and large scale
metabolite proofing is a desired
but not yet achieved goal. As
the first step in this direction,
we are developing a new generation
of intracellular sensors called
molecular beacons (in collaboration
with J. Ju, N. Turro and W.
Tan), for direct imaging of
native mRNAs in living neurons
and synapses in real physiological
time. These new probes allow
us to monitor mRNA trafficking
and relocation in both cell
culture and intact ganglia as
neurons learn and remember.
We also continue to use microanalytical
approaches to detect and measure
microscopic quantities of important
chemicals in neurons. The primarily
technique, capillary electrophoresis,
is so exquisitely sensitive
that less than 0.01 of the volume
of a cell is all that is required
for a detailed chemical analysis
of its contents. Developing
(in collaboration with Jonathan
Sweedler) and extending these
microchemical technologies to
other cell types and multiple
metabolites (the neuronal "metabolome")
as well as their integration
to real-time electrophysiological
analysis (by on-line sampling
of cytoplasm) are our goals
for the coming years.
Comparative
Neurobiology Projects:
The third project focuses on
physiological mechanisms and
evolution of gaseous signaling
in the nervous system. Nitric
oxide (NO) is a signaling molecule
involved in a myriad of biological
functions. Nerve cells that
produce NO, the most mysterious
and least analyzed
population of cells in the brain,
are now our primary research
target. Recently, we identified
and mapped these neurons, successfully
isolating genes involved in
NO synthesis in molluscs, lower
chordates and cnidarians. We
are now examining how NO acts
in neuronal networks. Gaseous
transmission has been reconstructed
in cell culture where we have
started to create a molecular
portrait of a nitrergic neuron
and identify targets of NO action.
The emerging picture is that
NO can be highly compartmentalized
in a neuron, yet it might affect
numerous signaling pathways
by direct
and indirect interaction with
other cellular messengers. Finally,
we discovered that in certain
neurons NO can be generated
by a non-enzymatic mechanism
via nitrite-ascorbate interactions,
and we continue to characterize
this non-traditional mechanism
of NO synthesis in cells.
The
goal of our fourth project is
to use comparative strategies
to determine what genes define
neurons, focusing upon basal
animal groups. First, we make
and sequence cDNA libraries
from Trichoplax, having the
simplest organization of any
known animal, with only four
distinguishable cell types,
but with prominent social behavior.
Second, this year we started
to sequence Xenoturbella, an
enigmatic marine organism that
is considered as the representative
of the most basal deuterostome
group with a nervous system
in the form of a nerve net.
Finally, we use larval nervous
systems from molluscs and echinoderms
as important outgroups in this
genomic screening. Such an approach
will provide a foundation for
phylogenetic analysis of gene
loss and gain in both basal
and more derived nervous systems
and identify a subset of neuron-specific
genes. These projects are performed
in collaboration with Profs.
P. Anderson and B. Battelle.
The goals of the research are
twofold: to establish novel
genomic models and to understand
the molecular basis and evolution
of major signaling pathways
focusing on identification of
evolution's most conserved mechanisms
of neuronal identity and plasticity
as well as trends leading to
innovations in neuronal functions.
Personnel
Leonid
L. Moroz, Ph.D.
– Professor
of Neuroscience
James C. Netherton III, Chemist
– chemistry, lab management
Fahong Yu, Bioinformatics and
Software Specialist –
bioinformatics, database
Do
Sung Sohn, Graduate Student
– neuroscience, molecular
biology
Jinnie Sloan – Graduate Student
Yelena Bobkova – Biological Scientist
Matt Citarella – Laboratory Technician
Selected
Publications
Moroz,
L.L., Kohn, A.B. (2007) On
the comparative biology of NO synthetic pathways: Parallel
evolution of NO mediated signaling. In Nitric
Oxide, Advances in Experimental Biology, Volume 1. (Eds. Trimmer, B., Tota,
B. & Wang, T.) Elsevier
BV, Amsterdam, 1-45.
Antonov
I, Ha T, Antonova I, Moroz
L.L., & Hawkins
RD. (2007) Role of nitric oxide in classical conditioning
of siphon withdrawal in Aplysia. J.
of Neuroscience: 27(41):10993-11002.
Hatcher,
N.G., Zhang, X., Stuart, J.M., Moroz, L.L., Sweedler, J.V.
and Gillette, R.
(2007)
5-HT and 5-HT-SO(4), but not tryptophan or 5-HIAA levels
in single feeding neurons track animal hunger state.
J Neurochem. 2007 Nov 23; [Epub ahead of print]
Moroz,
L.L., Edwards, J. R., Puthanveettil,
S.V., Kohn, A.B. et al. (2006) Neuronal transcriptome in Aplysia:
Neuronal Compartments and Circuitry. Cell:
127(7): 1453-1467.
Bourlat, S.J., Juliusdottir, T., Lowe, C.J., Freeman, R., Aronowicz,
J., Kirschner, M., Lander, E.S., Thorndyke, M., Nakano, H., Kohn,
A.B., Heyland, A., Moroz, L.L., Copley, R.R., Telford, M.J. (2006).
Deuterostome Phylogeny Reveals Monophyletic Chordates and the New
Phylum Xenoturbellida. Nature, 444, 85-88.
Lovell, P. and Moroz, L.L. (2006). The largest
growth cones in the animal kingdom and dynamics of neuronal growth
in cell culture of Aplysia. April 15 Integrative and
Comparative Biology, 46, 847-870.
Heyland, A. Reitzel, A.M.., Price, D.A., Moroz, L.L. (2006). Endogenous
thyroid hormone synthesis in facultative planktotrophic larvae
of the sand dollar Clypeaster rosaceus: Implications for the evolutionary
loss of larval feeding. Evolution & Development, 8(6): 568-579.
Heyland, A., Moroz, L.L. (2006). Signaling mechanisms underlying
metamorphic transitions in animals. Integrative
and Comparative Biology. p. 1-17; doi:10.1093/icb/icl023, in press
Thomas Flatt, Leonid L. Moroz, Marc Tatar, and Andreas Heyland.
(2006). A potential role for thyroid hormones in Drosophila
melanogaster development and immunity. J. Integrative and
Comparative Biology,
1-18; doi:10.1093/icb/icl034, in press
Heyland, A. Reitzel, A.M.., Price, D.A., Moroz,
L.L. (2006). Endogenous thyroid hormone synthesis in facultative
planktotrophic larvae of the sand dollar Clypeaster rosaceus: Implications
for the evolutionary loss of larval feeding. Evolution & Development,
8(6): 568-579.
Ha,
T.J., Kohn, A.B., Bobkova, Y.V.,
Moroz, L.L. (2006) Molecular
characterization of NMDA-like
receptors in Aplysia
and Lymnaea: relevance
to memory mechanisms. Biological
Bulletin 210(3): 255-270.
Xu,
C., Xu, L., Yu, F., Tan, W.,
Moroz, L.L. and Li J. (2006)
Nonparametric estimation of
the number of unique sequences
in biological samples. IEEE
Transactions on Signal Processing. 54 (10), 3759-3767.
Heyland,
.A, Price, D.A., Bodnarova-Buganova,
M. and Moroz, L.L. (2006) Thyroid
hormone metabolism and peroxidase
function in two non-chordate
animals. J Exp Zoolog B
Mol Dev Evol. (Epub ahead
of Print PMID: 16739141.
Jezzini,
S.H., Reagin, S., Kohn, A.B.
and Moroz, L.L. (2006) Molecular
characterization and expression
of a two-pore domain potassium
channel in the CNS of Aplysia
californica. Brain
Res. 1094(1): 47-56.
Moroz,
L.L. (2006) Localization of
putative nitrergic neurons in
peripheral chemosensory areas
and the central nervous system
of Aplysia californica.
J Comp Neurol 495(1):10-20.
Knudsen,
B., Kohn, A.B., Nahir, B., McFadden,
C.S. and Moroz, L.L. (2006)
Complete DNA sequence of the
mitochondrial genome of the
sea-slug, Aplysia californica:
conservation of the gene order
in Euthyneura. Mol Phylogenet
Evol 38(2):459-469.
Hatcher,
N.G., Sudlow, L.C., Moroz, L.L.
and Gillette, R. (2006) Nitric
oxide potentiates cAMP-gated
cation current in feeding neurons
of Pleurobranchaea californica
independent of cAMP and cGMP
signaling pathways. J Neurophysiol
95(5):3219-3227.
Kohn,
A.B., Lea, J.M., Moroz, L.L.
and Greenberg, R.M. (2006) Schistosoma
mansoni: Use of a fluorescent
indicator to detect nitric oxide
and related species in living
parasites. Exp Parasitol
113(2):130-133.
Lovell,
P., Jezzini, S.H. and Moroz,
L.L. (2006) Electroporation
of neurons and growth cones
in Aplysia californica.
J Neurosci Methods 151(2):114-120.
Drake,
T.J., Jezzini, S., Lovell, P.,
Moroz, L.L. and Tan, W. (2005)
Single cell glutamate analysis
in Aplysia sensory
neurons. J Neurosci Methods,
144 (1 ): 73-77.
Bodnárová, M.,
Martásek, P. and Moroz,
L.L. (2005) Calcium/calmodulin-dependent
nitric oxide synthase activity
in the CNS of Aplysia californica:
Biochemical characterization
and link to cGMP pathways. J.
Inorg. Biochemistry, Apr;
99 (4):922-8.
Moroz, L.L., Dahlgren, R.L.,
Boudko, D., Sweedler, J.V. and
Lovell, P. (2005) Direct single
cell determination of nitric
oxide synthase related metabolites
in identified nitrergic neurons.
J. Inorg. Biochemistry.
99 (4): 929-39.
Tan, L., Li, Y., Moroz, L.,
Drake, T., Munteanu, A., Yang,
C., Martinez, K. and Tan, W.
(2005) Molecular beacons for
bioanalytical applications.,
The Analyst 130 (7):
1002-1005.
Jezzini, S.H., Bodnarova, M.
and Moroz, L.L. (2005) Two-color
in-situ hybridization in the
CNS of Aplysia californica.
J. Neurosci. Methods.
149 (1): 15-25.
Heyland,
A. and Moroz, L.L. (2005) Cross-kingdom
hormonal signaling: an insight
from thyroid hormone functions
in marine larvae. J. Exp.
Biol. 208 (Pt 23): 4355-61.
Gruenhagen,
J.A., Lovell P., Moroz, L.L.
and Yeung, E.S. (2004) Monitoring
real-time release of ATP from
the molluscan central nervous
system. J. Neurosci. Methods
139(2):145-152.
Ostrovskaya, O., Moroz L. and
Krishtal O. (2004) Modulatory
action of RFamide-related peptides
on acid-sensing ionic channels
is pH dependent: the role of
arginine. J. Neurochem.
91(1): 252-255.
Yudin, Y.K., Tamarova, Z.A.,
Ostrovskaya, O.I., Moroz, L.L.
and Krishtal, O.A. (2004) RFa-related
peptides are algogenic: evidence
in vitro and in
vivo. Eur. J. Neurosci.
20(5):1419-1423.
Moroz, L.L., Meech, R.W., Sweedler,
J.V. and Mackie, G.O. (2004)
Nitric oxide regulates swimming
in the jellyfish Aglantha
digitale. J. Comparative
Neurology: 471(1): 26-36.
Walters, E.T., Bodnárová,
M., Billy, A.J., Dulin, M.F.,
Diaz-Rios, M., Muller M. and
Moroz, L.L. (2004) Somatotopic
organization and functional
properties of mechanosensory
neurons expressing sensorin-A
mRNA in Aplysia californica.
J. Comparative Neurology:
471(2): 219-240.
Zhulidov,
P. A., Bogdanova, E. A., Altshuler,
I.M., Vagner, L.L., Khaspekov,
G.L., Kozhemyako, V.B., Matz,
M.V., Meleshkevitch, E., Moroz,
L.L., Lukyanov, S.A. and Shagin,
D.A. (2004) Simple full-length
cDNA normalization using kamchatka
crab duplex specific nuclease.
Nuc. Acid Res. 32 (3):
1-8.
Jezzini, S. and Moroz L.L. (2004)
Identification and distribution
two-pore domain potassium channels
from the CNS of Aplysia
californica. Brain
Res. Molecular Brain Res.
127(1-2): 27-38.
Boudko,
D.Y., Cooper, B.Y., Harvey,
W.R. and Moroz, L.L. (2002)
High-resolution microanalysis
of nitrite and nitrate in neuronal
tissues by capillary electrophoresis
with conductivity detection.
J. Chromatogr. B. 774:
97-104.
Kim,
W.S., Dahlgren, R.L., Moroz,
L.L., Sweedler, J.V. (2002)
Ascorbic acid assays of individual
neurons and neuronal tissues
using capillary electrophoresis
with laser-induced fluorescence
detection. Anal. Chem.
74: 5614-5620.
Zhang
X., Kim W.S., Hatcher N., Potgieter
K., Moroz L.L., Gillette R.,
Sweedler J.V. (2002) Interfering
with nitric oxide measurements:
4,5-diaminofluorescein reacts
with dehydroascorbic acid and
ascorbic acid. J Biol Chem.
277(50): 48472-48478.
Moroz,
L.L. (2001) Gaseous transmission
across time and species. Amer.
Zool.41: 304-320.
Vilim,
F. S., V. Alexeeva, Moroz, L.L.
et al. (2001). "Cloning,
expression and processing of
the CP2 neuropeptide precursor
of Aplysia." Peptides
22(12): 2027-38.
Boudko
D.Y., Moroz L.L., Harvey W.R.,
Linser P.J. (2001a) Alkalinization
by chloride/bicarbonate pathway
in larval mosquito midgut. Proc
Natl Acad Sci U S A 98:15354-15359.
Boudko
D.Y., Moroz L.L., Linser P.J.,
Trimarchi J.R., Smith P.J.,
Harvey WR (2001b) In situ
analysis of pH gradients in
mosquito larvae using non-invasive,
self-referencing, pH-sensitive
microelectrodes. J Exp Biol
204:691-699.
Kohn
A.B., Moroz L.L., Lea J.M.,
Greenberg R.M. (2001) Distribution
of nitric oxide synthase immunoreactivity
in the nervous system and peripheral
tissues of Schistosoma mansoni.
Parasitology 122 Pt
1:87-92.
Gillette,
R., Huang, R., Hatcher, N.,
Moroz, L.L. (2000). Cost-benefit
analysis potential in feeding
behavior of a predatory snail
by integration of hunger, taste
and pain. Proc Natl Acad
Sci USA: 97, 3585-3590.
Moroz,
L.L., Norekian, T.P., Pirtle,
T.J., Robertson, K.J., Satterlie,
R.A. (2000). Distribution of
NADPH-diaphorase reactivity
and effects of NO-donors on
feeding and locomotory circuitry
in the pteropod mollusc, Clione
limacina. J. Comp. Neurol.,
427, 274-284
Moroz,
L.L. (2000). On the origin and
early evolution of neuronal
NO signaling: A comparative
analysis. In: Nitric oxide
and free radicals in peripheral
neurotransmission. (Kalsner
S, ed). New York: Springer-Verlag:
1-34.
Moroz,
L. L. (2000) Giant identified
NO-releasing neurons and comparative
histochemistry of putative nitrergic
systems in gastropod molluscs.
Microscopy Research and
Technique 49: 557-569.
Moroz
L.L., Gillette R., Sweedler
J.V. (1999) Single-cell analyses
of nitrergic neurons in simpler
nervous systems. J Exp Biol
202:333-341.
Hurst
W.J., Moroz, L.L., Gillette,
M.U. and Gillette, R. (1999).
Nitric oxide synthase immunolabeling
in the molluscan CNS and peripheral
tissues. Biochem. Biophys.
Res. Com. 262, 545-548.
Moroz,
L.L., Norby, S.W., Cruz, L.,
Sweedler, J.V., Gillette, R.,
Clarkson, R.B. (1998). Non-enzymatic
production of nitric oxide (NO)
from NO synthase inhibitors.
Biochem. Biophys. Res. Com.,
253, 571-576.
Fuller,
R., Moroz, L.L., Gillette, R.,
and Sweedler, J.V. (1998). Serotonin
and related molecules in identified
neurons: Direct analysis of
intracellular concentrations
by capillary electrophoresis
with fluorescence spectroscopy.
Neuron, 20, 173-181.
Floyd,
P., Moroz, L.L., Gillette, R.,
and Sweedler, J.V. (1998). Capillary
electrophoresis analysis of
nitric oxide synthase related
metabolites in single identified
neurons. Anal. Chem.,
70, 2243-2247.
Sudlow,
L., J. Jing, Moroz, L.L., and
Gillette, R. (1998). Serotonin-containing
neurons in the CNS of the opisthobranch
molluscs,Pleurobranchaea
californica and Tritonia
diomedea.J.Comp. Neurol.,395,
466-480.
Moroz,
L.L., Sudlow, L.C., Jing, J.,
Gillette, R. (1997). Serotonin-immuno
reactivity in peripheral tissues
of the opisthobranch molluscs
Pleurobranchaea californica
and Tritonia diomedea. J.
Comp. Neurol. 382, 176-188.
Cruz,
L., Moroz, L.L., Gillette, R.,
Sweedler, J.V. (1997). Nitrite
and nitrate levels in individual
molluscan neurons: Single cell
capillary electrophoresis analysis.
J. Neurochem., 69, 110-115.
Moroz,
L.L. and Gillette, R. (1996).
NADPH-diaphorase localization
in the CNS and peripheral tissues
of the predatory sea-slug, Pleurobranchaea
californica. J. Comp. Neurol.,
367, 607-622.
Moroz,
L.L., Chen, D., Gillette. M.U.
and R. Gillette (1996). Nitric
oxide synthase activity in the
molluscan CNS. J. Neurochem.
66, N2, 873-876.
Leake,
L.D. and Moroz L.L. (1996).
Putative nitric oxide synthase
(NOS)-containing cells in the
central ner-vous system of the
leech, Hirudo medicinalis:
NADPH-diaphorase histochemistry.
Brain Res.723,115-124.
Garden,
R.W., Moroz, L.L., Moroz, T.P.,
Shippy, S.A., Sweedler, J.V.
(1996). Excess salt removal
with matrix rinsing: Direct
peptide profiling of neurons
from marine invertebrates using
matrix-assisted laser desorption/ionization
time-of-flight mass spectrometry.
J. Mass Spectrometry
31,1126-1130.
Moroz
L.L, Gillette R (1996) From
Polyplacophora to Cephalopoda:
comparative analysis of nitric
oxide signaling in Mollusca.
In: Neurobiology of invertebrates:
simple and complex regulatory
systems. (Salanki J, S-Rozsa
K and Elekes K, eds), pp. 169-182.
Budapest: Akademia Kiado.
Kurenny,
D.E., Moroz, LL., Turner, R.W.,
Sharkey, K.A. and Barnes, S.
(1994). Modulation of ionic
channels in rod photoreceptors
by nitric oxide. Neuron,
13, 315-324.
Moroz
L.L, Radbourne S, Winlow W (1996)
The use of NO-sensitive microelectrodes
for direct detection of nitric
oxide (NO) production in molluscs.
In: Neurobiology of invertebrates:
simple and complex regulatory
systems. (Salanki J, S-Rozsa
K and Elekes K, eds), pp. 155-167.
Budapest: Akademia Kiado.
Turner, R.W. and Moroz, L.L.
(1995). Localization of nicotinamide
adenine dinucleotide phosphate-diaphorase
activity in electrosensory and
electromotor systems of a gymnotiform
teleost, Apteronotus leptorhynchus.
J. Comp. Neurol., 356,
261-274.
Park, J.-H., Budko, D.Yu, Moroz,
L.L. and Winlow, W. (1995) Optical
monitoring of movements in small
animals and in semi-intact preparations.
J. Neurosci. Meth.
56, 181-186.
Kurenni, D.E., Thurlow, G.A.,
Turner, R.W., Moroz, L.L., Sharkey,
K.A. and Barnes, S. (1995).
Nitric oxide synthase in tiger
salamander retina. J. Comp.
Neurol., 361, 525-536. |