Joseph F. Ryan, Ph.D.

Associate Professor of Biology
Joseph F. Ryan, Ph.D.

Associate Professor of Biology

Dr. Joseph Ryan has been faculty at Whitney Lab since 2014. Before that, he was a postdoctoral scholar at Sars International Centre for Marine Molecular Biology in Bergen, Norway and a research fellow at the National Human Genome Research Institute at the National Institutes of Health. He earned his Ph.D. in bioinformatics from Boston University.

Allen Distinguished Investigator

Ryan Lab Website

Email: joseph.ryan@whitney.ufl.edu

Observations into Animal History

Ryan Lab Saturation Data

The remarkable display of diversity in the animal kingdom is a result of hundreds of millions of years of evolutionary change. We combine experimental techniques, genome sequencing, and phylogenetic analyses to address fundamental questions about the sources of this evolutionary diversity in marine animals. The main animal models in the lab are ctenophores (comb jellies) and cnidarians (e.g., anemones, jellyfish, stalked jellies), but we also have projects involving annelids, echinoderms, ectoprocts, flatworms, and other marine invertebrates.

Key questions in the lab include:

  • How are animals related?
  • How are genomes evolving and what effect have these changes had on animal evolution?
  • How do animals adapt to extreme environments like the deep sea?
  • How do changes in life history arise and what affect do they have on genomes?
  • What are the underlying mechanisms that have shaped animal regeneration?
  • What drives reproduction in ctenophores?
  • How can we improve phylogenetic methods to better reconstruct the history of life?

Approaches

The Ryan lab is interdisciplinary and highly integrative. We combine genomics and phylogenetics with a wide array of other fields, including physiology, developmental biology, behavior, and neurobiology. The Ryan lab is highly collaborative, working with biologists from all over the world whose primary expertise is distinct from its own (e.g., taxonomists, developmental biologists, ecologists, cell biologists, phsyiologists) but share a passion for understanding evolutionary processes. This arrangement allows problems to be approached with a wide surface of knowledge and provides the shared language (evolution) to synthesize collaborative findings.


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I am a bioinformatician trained in evolutionary genomics.

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Publications

Publications

Recent Publications (2011-Present)

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Current Lab Members

Current Lab Members

Joseph F Ryan Current Lab Members

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